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Problem:

I am getting error message in r with following code i wrote:

ig<-make_network(physeq,distance="jaccard", type = "taxa", max.dist=0.3, weighted=TRUE) pnt<-plot_network(ig, physeq, line_weight=0.4, type = "taxa", color = "Class", shape = "Phylum")

warning message: attributes are not identical across measure variables; they will be dropped

by (750 points)  
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1 Answer

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Solution:

>Updated phyloseq to latest version

>Use the latestplot_net function

Further Reading:

https://github.com/joey711/phyloseq/issues/598

https://bioconductor.org/packages/release/bioc/html/phyloseq.html

by (3.5k points)  
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